Package: SCORPION 1.0.2

SCORPION: Single Cell Oriented Reconstruction of PANDA Individual Optimized Networks

Constructs gene regulatory networks from single-cell gene expression data using the PANDA (Passing Attributes between Networks for Data Assimilation) algorithm.

Authors:Daniel Osorio [aut, cre], Marieke L. Kuijjer [aut]

SCORPION_1.0.2.tar.gz
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SCORPION.pdf |SCORPION.html✨
SCORPION/json (API)

# Install 'SCORPION' in R:
install.packages('SCORPION', repos = c('https://dosorio.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:
  • scorpionTest - Example single-cell gene expression, motif, and ppi data

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.00 score 8 scripts 523 downloads 1 exports 15 dependencies

Last updated 9 months agofrom:07f051a65d. Checks:1 OK, 6 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKJan 25 2025
R-4.5-winNOTEJan 25 2025
R-4.5-linuxNOTEJan 25 2025
R-4.4-winNOTEJan 25 2025
R-4.4-macNOTEJan 25 2025
R-4.3-winNOTEJan 25 2025
R-4.3-macNOTEJan 25 2025

Exports:scorpion

Dependencies:clicpp11glueigraphirlbalatticelifecyclemagrittrMatrixpbapplypkgconfigRANNRhpcBLASctlrlangvctrs