Package: Peptides 2.4.6

Peptides: Calculate Indices and Theoretical Physicochemical Properties of Protein Sequences

Includes functions to calculate several physicochemical properties and indices for amino-acid sequences as well as to read and plot 'XVG' output files from the 'GROMACS' molecular dynamics package.

Authors:Daniel Osorio [aut, cre], Paola Rondon-Villarreal [aut, ths], Rodrigo Torres [aut, ths], J. Sebastian Paez [ctb], Luis Pedro Coelho [ctb], Richèl J.C. Bilderbeek [ctb], Florian C. Sigloch [ctb]

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Peptides/json (API)

Peer review:

Bug tracker:https://github.com/dosorio/peptides/issues

On CRAN:

bioinformaticscalculate-indicespeptidesprotein-sequencesqsar

31 exports 79 stars 4.62 score 1 dependencies 7 dependents 9 mentions 217 scripts 1.1k downloads

Last updated 9 months agofrom:a1a91be11b. Checks:OK: 9. Indexed: yes.

Exports:aaCompaaDescriptorsaaListaaSMILESaIndexautoCorrelationautoCovarianceblosumIndicesbomanchargecrossCovariancecrucianiPropertiesfasgaiVectorshmomenthydrophobicityinstaIndexkideraFactorslengthpepmassShiftmembposmswhimScoresmwmzpIplotXVGprotFPreadXVGstScalestScalesvhseScaleszScales

Dependencies:Rcpp